[artix-build-failures] [galaxy] Failure: python-xarray-2022.03.0-1

jenkins at artixlinux.org jenkins at artixlinux.org
Mon Mar 21 08:47:24 CET 2022


   Build: x86_64/community

   Name: python-xarray-2022.03.0-1

   author: qontinuum

   email: qontinuum at artixlinux.org

   [1]https://orion.artixlinux.org/job/packagesPython/job/python-xarray/jo
   b/master/3/

References

   1. https://orion.artixlinux.org/job/packagesPython/job/python-xarray/job/master/3/
-------------- next part --------------
Push event to branch master
Looking up repository packagesPython/python-xarray
Querying the current revision of branch master...
Current revision of branch master is fa4291bb40fb95688a5e5c6c444197be96b390f9
Obtained Jenkinsfile from fa4291bb40fb95688a5e5c6c444197be96b390f9
Loading library artix-ci at master
Attempting to resolve master from remote references...
 > git --version # timeout=10
 > git --version # 'git version 2.32.0'
 > git ls-remote -- https://gitea.artixlinux.org/artix/pipeline-libs.git # timeout=10
Found match: refs/heads/master revision d9ed61b32f86824fd57e33b28d07d6ad7820bf63
Selected Git installation does not exist. Using Default
The recommended git tool is: NONE
Warning: CredentialId "jenkins-gotea-token" could not be found.
Cloning the remote Git repository
Cloning with configured refspecs honoured and without tags
Cloning repository https://gitea.artixlinux.org/artix/pipeline-libs.git
 > git init /var/lib/jenkins/workspace/kagesPython_python-xarray_master at libs/d1b6e538991d6cf27c1f72e8cf4d6e290b22a9c93094b0e97e3a05b8d58db898 # timeout=10
Fetching upstream changes from https://gitea.artixlinux.org/artix/pipeline-libs.git
 > git --version # timeout=10
 > git --version # 'git version 2.32.0'
 > git fetch --no-tags --force --progress -- https://gitea.artixlinux.org/artix/pipeline-libs.git +refs/heads/master:refs/remotes/origin/master # timeout=10
 > git config remote.origin.url https://gitea.artixlinux.org/artix/pipeline-libs.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/master:refs/remotes/origin/master # timeout=10
Avoid second fetch
Checking out Revision d9ed61b32f86824fd57e33b28d07d6ad7820bf63 (master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f d9ed61b32f86824fd57e33b28d07d6ad7820bf63 # timeout=10
Commit message: "include version in build email subject"
[Gitea] Notifying branch build status: PENDING Build started...
[Gitea] Notified
[Pipeline] Start of Pipeline
[Pipeline] node
Still waiting to schedule task
Waiting for next available executor
Running on Jenkins in /var/lib/jenkins/workspace/kagesPython_python-xarray_master
[Pipeline] {
[Pipeline] timestamps
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Prepare)
[Pipeline] catchError
[Pipeline] {
[Pipeline] checkout
[2022-03-21T07:47:09.738Z] The recommended git tool is: NONE
[2022-03-21T07:47:09.739Z] Warning: CredentialId "jenkins-gotea-token" could not be found.
[2022-03-21T07:47:09.739Z] Cloning the remote Git repository
[2022-03-21T07:47:09.739Z] Cloning with configured refspecs honoured and without tags
[2022-03-21T07:47:09.739Z] Cloning repository https://[email protected]/packagesPython/python-xarray.git
[2022-03-21T07:47:09.740Z]  > git init /var/lib/jenkins/workspace/kagesPython_python-xarray_master # timeout=10
[2022-03-21T07:47:09.747Z] Fetching upstream changes from https://[email protected]/packagesPython/python-xarray.git
[2022-03-21T07:47:09.747Z]  > git --version # timeout=10
[2022-03-21T07:47:09.750Z]  > git --version # 'git version 2.32.0'
[2022-03-21T07:47:09.750Z]  > git fetch --no-tags --force --progress -- https://[email protected]/packagesPython/python-xarray.git +refs/heads/master:refs/remotes/origin/master # timeout=10
[2022-03-21T07:47:09.931Z]  > git config remote.origin.url https://[email protected]/packagesPython/python-xarray.git # timeout=10
[2022-03-21T07:47:09.935Z]  > git config --add remote.origin.fetch +refs/heads/master:refs/remotes/origin/master # timeout=10
[2022-03-21T07:47:09.940Z] Avoid second fetch
[2022-03-21T07:47:09.940Z] Checking out Revision fa4291bb40fb95688a5e5c6c444197be96b390f9 (master)
[2022-03-21T07:47:09.940Z]  > git config core.sparsecheckout # timeout=10
[2022-03-21T07:47:09.944Z]  > git checkout -f fa4291bb40fb95688a5e5c6c444197be96b390f9 # timeout=10
[2022-03-21T07:47:09.953Z] Commit message: "[trunk] -> [community] 'python-xarray-2022.03.0-1' add"
[2022-03-21T07:47:09.953Z]  > git rev-list --no-walk 4af7d834332ec0d28607cc6fee685cdce022a3c8 # timeout=10
[2022-03-21T07:47:09.963Z] Cleaning workspace
[2022-03-21T07:47:09.963Z]  > git rev-parse --verify HEAD # timeout=10
[2022-03-21T07:47:09.967Z] Resetting working tree
[2022-03-21T07:47:09.967Z]  > git reset --hard # timeout=10
[2022-03-21T07:47:09.973Z]  > git clean -fdx # timeout=10
[2022-03-21T07:47:09.978Z] [Gitea] Notifying branch build status: PENDING Build started...
[2022-03-21T07:47:10.135Z] [Gitea] Notified
[Pipeline] libraryResource
[Pipeline] readYaml
[Pipeline] sh
[2022-03-21T07:47:10.405Z] + git show -s --format=%an fa4291bb40fb95688a5e5c6c444197be96b390f9
[Pipeline] sh
[2022-03-21T07:47:10.660Z] + git show -s --format=%ae fa4291bb40fb95688a5e5c6c444197be96b390f9
[Pipeline] sh
[2022-03-21T07:47:10.918Z] + git show --pretty=format: --name-status fa4291bb40fb95688a5e5c6c444197be96b390f9
[Pipeline] fileExists
[Pipeline] sh
[2022-03-21T07:47:11.191Z] + pkg2yaml -d x86_64/community
[Pipeline] readYaml
[Pipeline] }
[Pipeline] // catchError
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Build)
[Pipeline] withCredentials
[2022-03-21T07:47:11.277Z] Masking supported pattern matches of $BUILDBOT_GPGP
[Pipeline] {
[Pipeline] dir
[2022-03-21T07:47:11.304Z] Running in /var/lib/jenkins/workspace/kagesPython_python-xarray_master/x86_64/community
[Pipeline] {
[Pipeline] catchError
[Pipeline] {
[Pipeline] sh
[2022-03-21T07:47:11.570Z] + buildpkg -C -d galaxy
[2022-03-21T07:47:14.053Z] :: Synchronizing package databases...
[2022-03-21T07:47:14.053Z]  system downloading...
[2022-03-21T07:47:14.053Z]  world downloading...
[2022-03-21T07:47:14.053Z]  galaxy downloading...
[2022-03-21T07:47:14.053Z] :: Starting full system upgrade...
[2022-03-21T07:47:14.053Z]  there is nothing to do
[2022-03-21T07:47:15.396Z] ==> Building in chroot for [default] (x86_64)...
[2022-03-21T07:47:16.196Z] ==> Synchronizing chroot copy [/build/buildpkg/default-x86_64/root] -> [jenkins]...done
[2022-03-21T07:47:16.747Z] ==> Making package: python-xarray 2022.03.0-1 (Mon Mar 21 08:47:16 2022)
[2022-03-21T07:47:16.747Z] ==> Retrieving sources...
[2022-03-21T07:47:16.747Z]   -> Downloading python-xarray-2022.03.0.tar.gz...
[2022-03-21T07:47:16.747Z]   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
[2022-03-21T07:47:16.747Z]                                  Dload  Upload   Total   Spent    Left  Speed
[2022-03-21T07:47:16.997Z] 
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100   135  100   135    0     0    708      0 --:--:-- --:--:-- --:--:--   710
[2022-03-21T07:47:17.247Z] 
100 2867k    0 2867k    0     0  4250k      0 --:--:-- --:--:-- --:--:-- 4250k
[2022-03-21T07:47:17.498Z] ==> Validating source files with sha256sums...
[2022-03-21T07:47:17.498Z]     python-xarray-2022.03.0.tar.gz ... Passed
[2022-03-21T07:47:20.726Z] ==> Making package: python-xarray 2022.03.0-1 (Mon 21 Mar 2022 07:47:20 AM UTC)
[2022-03-21T07:47:20.726Z] ==> Checking runtime dependencies...
[2022-03-21T07:47:20.726Z] ==> Installing missing dependencies...
[2022-03-21T07:47:20.726Z] resolving dependencies...
[2022-03-21T07:47:20.726Z] looking for conflicting packages...
[2022-03-21T07:47:20.726Z] 
[2022-03-21T07:47:20.726Z] Package (16)                  New Version  Net Change
[2022-03-21T07:47:20.726Z] 
[2022-03-21T07:47:20.726Z] world/blas                    3.10.0-1       0.33 MiB
[2022-03-21T07:47:20.726Z] world/cblas                   3.10.0-1       0.20 MiB
[2022-03-21T07:47:20.726Z] world/lapack                  3.10.0-1       7.18 MiB
[2022-03-21T07:47:20.726Z] system/libnsl                 2.0.0-2        0.07 MiB
[2022-03-21T07:47:20.726Z] system/python                 3.10.2-1      53.85 MiB
[2022-03-21T07:47:20.726Z] world/python-appdirs          1.4.4-6        0.07 MiB
[2022-03-21T07:47:20.726Z] galaxy/python-dateutil        2.8.2-4        0.82 MiB
[2022-03-21T07:47:20.726Z] galaxy/python-more-itertools  8.12.0-1       0.48 MiB
[2022-03-21T07:47:20.726Z] world/python-ordered-set      4.0.2-6        0.06 MiB
[2022-03-21T07:47:20.726Z] world/python-pyparsing        3.0.3-1        0.94 MiB
[2022-03-21T07:47:20.726Z] galaxy/python-pytz            2021.3-4       0.14 MiB
[2022-03-21T07:47:20.726Z] world/python-setuptools       1:59.4.0-1     2.96 MiB
[2022-03-21T07:47:20.726Z] world/python-six              1.16.0-5       0.09 MiB
[2022-03-21T07:47:20.726Z] world/python-numpy            1.22.3-1      33.33 MiB
[2022-03-21T07:47:20.726Z] world/python-packaging        20.9-7         0.18 MiB
[2022-03-21T07:47:20.726Z] galaxy/python-pandas          1.4.1-1       62.47 MiB
[2022-03-21T07:47:20.726Z] 
[2022-03-21T07:47:20.726Z] Total Installed Size:  163.17 MiB
[2022-03-21T07:47:20.726Z] 
[2022-03-21T07:47:20.726Z] :: Proceed with installation? [Y/n] 
[2022-03-21T07:47:20.726Z] checking keyring...
[2022-03-21T07:47:20.726Z] checking package integrity...
[2022-03-21T07:47:21.277Z] loading package files...
[2022-03-21T07:47:21.527Z] checking for file conflicts...
[2022-03-21T07:47:21.527Z] :: Processing package changes...
[2022-03-21T07:47:21.527Z] installing blas...
[2022-03-21T07:47:21.527Z] installing cblas...
[2022-03-21T07:47:21.527Z] installing lapack...
[2022-03-21T07:47:21.527Z] installing libnsl...
[2022-03-21T07:47:21.527Z] installing python...
[2022-03-21T07:47:21.778Z] Optional dependencies for python
[2022-03-21T07:47:21.778Z]     python-setuptools [pending]
[2022-03-21T07:47:21.778Z]     python-pip
[2022-03-21T07:47:21.778Z]     sqlite [installed]
[2022-03-21T07:47:21.778Z]     mpdecimal: for decimal
[2022-03-21T07:47:21.778Z]     xz: for lzma [installed]
[2022-03-21T07:47:21.778Z]     tk: for tkinter
[2022-03-21T07:47:21.778Z] installing python-numpy...
[2022-03-21T07:47:22.028Z] Optional dependencies for python-numpy
[2022-03-21T07:47:22.028Z]     openblas: faster linear algebra
[2022-03-21T07:47:22.028Z] installing python-pyparsing...
[2022-03-21T07:47:22.028Z] Optional dependencies for python-pyparsing
[2022-03-21T07:47:22.028Z]     python-railroad-diagrams: for generating Railroad Diagrams
[2022-03-21T07:47:22.028Z]     python-jinja: for generating Railroad Diagrams
[2022-03-21T07:47:22.028Z] installing python-six...
[2022-03-21T07:47:22.028Z] installing python-packaging...
[2022-03-21T07:47:22.028Z] installing python-dateutil...
[2022-03-21T07:47:22.028Z] installing python-pytz...
[2022-03-21T07:47:22.028Z] installing python-appdirs...
[2022-03-21T07:47:22.028Z] installing python-more-itertools...
[2022-03-21T07:47:22.028Z] installing python-ordered-set...
[2022-03-21T07:47:22.028Z] installing python-setuptools...
[2022-03-21T07:47:22.028Z] installing python-pandas...
[2022-03-21T07:47:22.278Z] Optional dependencies for python-pandas
[2022-03-21T07:47:22.278Z]     python-pandas-datareader: pandas.io.data replacement (recommended)
[2022-03-21T07:47:22.278Z]     python-numexpr: needed for accelerating certain numerical operations (recommended)
[2022-03-21T07:47:22.278Z]     python-bottleneck: needed for accelerating certain types of nan evaluations (recommended)
[2022-03-21T07:47:22.278Z]     python-beautifulsoup4: needed for read_html function
[2022-03-21T07:47:22.278Z]     python-jinja: needed for conditional HTML formatting
[2022-03-21T07:47:22.279Z]     python-pyqt5: needed for read_clipboard function (only one needed)
[2022-03-21T07:47:22.279Z]     python-pytables: needed for HDF5-based storage
[2022-03-21T07:47:22.279Z]     python-sqlalchemy: needed for SQL database support
[2022-03-21T07:47:22.279Z]     python-scipy: needed for miscellaneous statistical functions
[2022-03-21T07:47:22.279Z]     python-xlsxwriter: alternative Excel XLSX output
[2022-03-21T07:47:22.279Z]     python-blosc: for msgpack compression using blosc
[2022-03-21T07:47:22.279Z]     python-html5lib: needed for read_hmlt function (and/or python-lxml)
[2022-03-21T07:47:22.279Z]     python-lxml: needed for read_html function (and/or python-html5lib)
[2022-03-21T07:47:22.279Z]     python-matplotlib: needed for plotting
[2022-03-21T07:47:22.279Z]     python-openpyxl: needed for Excel XLSX input/output
[2022-03-21T07:47:22.279Z]     python-psycopg2: needed for PostgreSQL engine for sqlalchemy
[2022-03-21T07:47:22.279Z]     python-pymysql: needed for MySQL engine for sqlalchemy
[2022-03-21T07:47:22.279Z]     python-qtpy: needed for read_clipboard function (only one needed)
[2022-03-21T07:47:22.279Z]     python-tabulate: needed for printing in Markdown-friendly format
[2022-03-21T07:47:22.279Z]     python-fsspec: needed for handling files aside from local and HTTP
[2022-03-21T07:47:22.279Z]     xclip: needed for read_clipboard function (only one needed)
[2022-03-21T07:47:22.279Z]     python-xlrd: needed for Excel XLS input
[2022-03-21T07:47:22.279Z]     python-xlwt: needed for Excel XLS output
[2022-03-21T07:47:22.279Z]     xsel: needed for read_clipboard function (only one needed)
[2022-03-21T07:47:22.279Z]     zlib: needed for compression for msgpack [installed]
[2022-03-21T07:47:22.529Z] ==> Checking buildtime dependencies...
[2022-03-21T07:47:22.529Z] ==> Installing missing dependencies...
[2022-03-21T07:47:22.529Z] error: target not found: python-dask
[2022-03-21T07:47:22.529Z] error: target not found: python-distributed
[2022-03-21T07:47:22.529Z] error: target not found: python-fsspec
[2022-03-21T07:47:22.529Z] error: target not found: python-h5py
[2022-03-21T07:47:22.529Z] ==> ERROR: 'pacman' failed to install missing dependencies.
[2022-03-21T07:47:22.529Z] ==> Missing dependencies:
[2022-03-21T07:47:22.529Z]   -> python-setuptools-scm
[2022-03-21T07:47:22.529Z]   -> python-pytest
[2022-03-21T07:47:22.529Z]   -> python-pytest-xdist
[2022-03-21T07:47:22.529Z]   -> python-aiobotocore
[2022-03-21T07:47:22.529Z]   -> python-aiohttp
[2022-03-21T07:47:22.529Z]   -> python-bottleneck
[2022-03-21T07:47:22.529Z]   -> python-boto3
[2022-03-21T07:47:22.529Z]   -> python-cftime
[2022-03-21T07:47:22.529Z]   -> python-dask
[2022-03-21T07:47:22.529Z]   -> python-distributed
[2022-03-21T07:47:22.529Z]   -> python-fsspec
[2022-03-21T07:47:22.529Z]   -> python-h5py
[2022-03-21T07:47:22.529Z]   -> python-hypothesis
[2022-03-21T07:47:22.529Z]   -> python-lxml
[2022-03-21T07:47:22.529Z]   -> python-matplotlib
[2022-03-21T07:47:22.529Z]   -> python-netcdf4
[2022-03-21T07:47:22.529Z]   -> python-numexpr
[2022-03-21T07:47:22.529Z]   -> python-pint
[2022-03-21T07:47:22.529Z]   -> python-requests
[2022-03-21T07:47:22.529Z]   -> python-scipy
[2022-03-21T07:47:22.529Z]   -> python-seaborn
[2022-03-21T07:47:22.780Z] ==> ERROR: Could not resolve all dependencies.
[2022-03-21T07:47:24.123Z] ==> ERROR: Build failed, check /build/buildpkg/default-x86_64/jenkins/build
[Pipeline] }
[2022-03-21T07:47:24.126Z] ERROR: Failed to build source
[2022-03-21T07:47:24.126Z] ERROR: script returned exit code 255
[Pipeline] // catchError
[Pipeline] }
[Pipeline] // dir
Post stage
[Pipeline] emailext
[2022-03-21T07:47:24.194Z] Sending email to: artix-build-failures at artixlinux.org


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